association	dataset	threshold value	standardized value
0179445-0000-3736	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
12,13-EODE-1108	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
1321N1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71534
17690704-SuppTable1	GeneSigDB Published Gene Signatures	1.0	null
17709385-Table1	GeneSigDB Published Gene Signatures	1.0	null
19658189-TableS4	GeneSigDB Published Gene Signatures	1.0	null
2,6-dimethylpiperidine-3806	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
6-benzylaminopurine-3726	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
624 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.47877
721_B_lymphoblasts	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.14149
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.837618
A172	CCLE Cell Line Gene CNV Profiles	-1.0	-2.12726
A172	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39547
A3-KAW	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.53061
A3KAW	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44561
ABC1	CCLE Cell Line Gene CNV Profiles	1.0	1.3886
AM-38	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.53061
AM38	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
ARHGDIB_Transfection_GDS4455_551_human_UM-UC-3 bladder carcinoma cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
AU565	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55816
Acute Myeloid Leukemia_LAML_TCGA-AB-2959-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5J8-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5JS-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5JZ-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Azoospermia	HuGE Navigator Gene-Phenotype Associations	1.0	null
BDCA4+_DentriticCells	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.69901
BEN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.81203
BEN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.5086
BHT101	CCLE Cell Line Gene CNV Profiles	1.0	1.66406
BICR10	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BT20	CCLE Cell Line Gene CNV Profiles	1.0	1.93509
BT474	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51974
BT549	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.60579
BW-B70C-1132	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Bipolar Disorder_frontal cortex_GSE5389	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.73982
Bladder Urothelial Carcinoma_BLCA_TCGA-BL-A13I-01A-11R-A13Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A2I2-01A-11R-A180-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DB-A4X9-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DB-A75L-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DB-A75M-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DH-A669-02A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-6392-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-6399-01A-12R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-7299-01A-21R-2027-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-A76O-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-E1-5302-01A-01R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YY-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-8114-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-A5R9-01A-11R-A28M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-A617-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-A61B-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-A74H-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-P5-A735-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-QH-A6CZ-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-QH-A870-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-RY-A83Z-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-S9-A6TW-01A-12R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-S9-A6U9-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-S9-A7QX-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-S9-A7R2-01A-21R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-TM-A84L-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-TM-A84O-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RV-02A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RW-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-VM-A8C9-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
C32	GDSC Cell Line Gene Expression Profiles	-1.0	-1.664
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13472
CAL-29	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CAL12T	CCLE Cell Line Gene CNV Profiles	1.0	1.87189
CAL33	CCLE Cell Line Gene CNV Profiles	1.0	1.34633
CAPAN-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CAY-10397-7087	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CCK-81	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.53061
CCRT CEM	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.25189
CD105+_Endothelial	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.892486
CD14+_Monocytes	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.931358
CD19+_BCells(neg._sel.)	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.960186
CD33+_Myeloid	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.864465
CD4+_Tcells	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.73151
CD56+_NKCells	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.34252
CD8+_Tcells	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.91255
CML-T1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
COLO 201	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.934511
COLO 741	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.848358
COLO 794	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.824067
COLO 800	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50926
COLO-205	GDSC Cell Line Gene Expression Profiles	-1.0	-1.93938
COLO-679	GDSC Cell Line Gene Expression Profiles	-1.0	-1.49616
COLO-684	COSMIC Cell Line Gene Mutation Profiles	1.0	null
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.837618
COR-L88	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.53061
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22427
COV362	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.63619
CREB1	JASPAR Predicted Transcription Factor Targets	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
CTCF_LNCaP clone FGC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTV-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1MN-01A-11R-A14Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A8YR-01A-12R-A37O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2RB-01A-11R-A18M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2RN-01A-12R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-FU-A3HZ-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
D-423MG	GDSC Cell Line Gene Expression Profiles	1.0	1.66665
DBTRG-05MG	GDSC Cell Line Gene Expression Profiles	1.0	1.93256
DL-PPMP-1121	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.91033
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.848358
DMS114	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5621
DMS454	CCLE Cell Line Gene CNV Profiles	-1.0	-2.3514
DOR 13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.85055
DU-145	GDSC Cell Line Gene Expression Profiles	-1.0	-1.51792
Daoy	GDSC Cell Line Gene Expression Profiles	1.0	1.72946
EB1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.74128
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825378
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2821
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.7116
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.55863
EFO21	CCLE Cell Line Gene CNV Profiles	1.0	1.45703
FADU	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37459
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.934511
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
FU97	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3666
Familial combined hyperlipidaemia_lymphoblast_GSE1010	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.49308
Fluorouracil	CTD Gene-Chemical Interactions	1.0	null
G121	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11079
GABPA	ENCODE Transcription Factor Targets	1.0	null
GABPA_HeLa-S3_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
GATA3_Ectopic expression_GDS4080_622_human_Basal Breast Cancer Cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
GCT	GDSC Cell Line Gene Expression Profiles	1.0	1.64487
GM133	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.857226
GM2313	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.897732
GM97	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.84206
GP5D	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GPI-PLD_OE_GDS2049_176_human_Hepatoma HepG2 cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
GSK3B_knockdown_202_GDS4305	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.59591
GSU	CCLE Cell Line Gene CNV Profiles	1.0	1.59598
H1 Cells	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	1.10419
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
H2AFZ_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H4	GDSC Cell Line Gene Expression Profiles	1.0	1.62
H513	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H9 Cells	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	-1.0	-1.12127
HCC1359	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4772
HCC1419	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.769432
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0721
HCC1500	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.18925
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03802
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03802
HCC1599	CCLE Cell Line Gene CNV Profiles	1.0	2.20545
HCC1806	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.877972
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.55739
HCC1937	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38124
HCC1937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50926
HCC2218	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.97682
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22294
HCC38	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19184
HCC827	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.878927
HCT15	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.73711
HEPG2	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.20249
HNF1B	JASPAR Predicted Transcription Factor Targets	1.0	null
HOP62	BioGPS Cell Line Gene Expression Profiles	1.0	0.866889
HOP92	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.942212
HS578T	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.818172
HS695T	CCLE Cell Line Gene CNV Profiles	1.0	2.09862
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.962567
HUPT4	CCLE Cell Line Gene CNV Profiles	1.0	1.80672
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-5374-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7397-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6003-01A-11R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6945-01A-11R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7429-01A-11R-2132-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7432-01A-11R-2132-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45R-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-DQ-7588-01A-11R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-IQ-A61O-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-MT-A67A-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A6T0-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A6T4-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-RS-A6TO-01A-32R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JD-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
IGR1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.91661
Infertility, Male	HuGE Navigator Gene-Phenotype Associations	1.0	null
JHOS-4	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.53061
JHOS2	CCLE Cell Line Gene CNV Profiles	1.0	1.65946
JHOS4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67759
JJN3	CCLE Cell Line Gene CNV Profiles	1.0	1.43198
JUND	JASPAR Predicted Transcription Factor Targets	1.0	null
KALS-1	GDSC Cell Line Gene Expression Profiles	1.0	1.99985
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64371
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.960386
KM12	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03802
KNS-42	GDSC Cell Line Gene Expression Profiles	-1.0	-1.42169
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21495
KRAS.600.LUNG.BREAST_UP.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	1.0	null
Kidney Chromophobe_KICH_TCGA-KO-8403-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney Chromophobe_KICH_TCGA-KO-8404-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4698-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4699-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4770-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-5681-11A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-5683-01A-11R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-7915-01A-11R-2204-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LB831-BLC	GDSC Cell Line Gene Expression Profiles	1.0	1.42918
LCLC-103H	GDSC Cell Line Gene Expression Profiles	1.0	2.15716
LN-229	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.85055
LN18	BioGPS Cell Line Gene Expression Profiles	1.0	1.01948
LOU-NH91	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04149
LOX IMVI	BioGPS Cell Line Gene Expression Profiles	1.0	2.41625
LOXIMVI	GDSC Cell Line Gene Expression Profiles	1.0	1.64991
LU-99A	GDSC Cell Line Gene Expression Profiles	1.0	1.46574
Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10U-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-CC-A9FU-01A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-G3-A7M9-01A-23R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-GJ-A9DB-01A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-K7-AAU7-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-6975-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-75-5147-01A-01R-1628-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-75-7027-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-78-7542-01A-21R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-86-8585-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-33-6737-01A-11R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-33-6738-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-39-5029-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-46-3769-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-85-7843-01A-11R-2125-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-98-A539-01A-31R-A262-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-G8-6914-01A-11R-2213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
M14	GDSC Cell Line Gene Expression Profiles	-1.0	-1.95424
MAPK1_knockdown_112_GSE27869	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.80818
MDA-MB-157	GDSC Cell Line Gene Expression Profiles	1.0	1.43162
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.826499
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.36632
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11993
MDA-MB-453	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1571
MDAMB157	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.45502
MDAMB231	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	2.40471
MDAMB415	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.706901
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.960386
MFE-319	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MG-132-1140	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08233
MIF_DEPLETION_GDS3626_95_human_HEK293 kidney cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
MKN-45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.962567
MKN45	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4863
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15148
MS751	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.787
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02679
Mesothelioma_MESO_TCGA-LK-A4O7-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Mesothelioma_MESO_TCGA-MQ-A4LM-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Mesothelioma_MESO_TCGA-NQ-A57I-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1299	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.848358
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03483
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.891586
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.21016
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10307
NCI-H2126	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26527
NCIH1355	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44719
NCIH1651	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36787
NCIH1781	CCLE Cell Line Gene CNV Profiles	1.0	1.4824
NCIH2030	CCLE Cell Line Gene CNV Profiles	1.0	2.0071
NCIH2172	CCLE Cell Line Gene CNV Profiles	-1.0	-2.15936
NCIH28	CCLE Cell Line Gene CNV Profiles	1.0	1.49044
NCIH727	CCLE Cell Line Gene CNV Profiles	-1.0	-1.87266
NCIH841	CCLE Cell Line Gene CNV Profiles	-1.0	-2.00352
NCIH929	CCLE Cell Line Gene CNV Profiles	1.0	2.59998
NCVADR RES	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.62327
NFATC3	TRANSFAC Predicted Transcription Factor Targets	1.0	null
NOTCH_DN.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	-1.0	null
NOTCH_INHIBITION_GDS2794_61_human_MOLT4 (T-cell acute lymphoblast leukemia) cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
NR5A2	TRANSFAC Predicted Transcription Factor Targets	1.0	null
NUGC4	CCLE Cell Line Gene CNV Profiles	1.0	1.52754
OAW28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.91326
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12655
OCIMY7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6294
OCUM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22362
OV7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.85055
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.878927
OVCA 429	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.988983
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64245
OVCAR3	BioGPS Cell Line Gene Expression Profiles	1.0	1.43209
OVCAR4	CCLE Cell Line Gene CNV Profiles	1.0	1.77582
OVCAR433	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48785
Oligospermia	HuGE Navigator Gene-Phenotype Associations	1.0	null
PADI4	CHEA Transcription Factor Targets	1.0	null
PADI4-21655091-MCF7-HUMAN	CHEA Transcription Factor Binding Site Profiles	1.0	null
PANC 02.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15148
PANC 05.04	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.892493
PHA-00846566E-7086	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PIAS1_Depletion_GDS5076_12_human_MDA-MB 231 breast cancer cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
PIAS1_KD_GSE44024_133_human_breast cancer cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
PK-59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03483
PK-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3736
PLK1_knockdown_98_GSE27869	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.95774
PNU-0230031-3732	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PRC_DEPLETION_GDS3532_96_human_U2OS cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
PRKCA_knockdown_118_GSE27869	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-2.03404
PTEN_KD_GDS2958_99_human_A431 - EPIDERMOID carcinoma cell line	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-F2-A44G-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-HZ-8636-01A-21R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-IB-7890-01A-12R-2204-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-IB-A5SS-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-IB-A7LX-01A-12R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-LB-A7SX-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-RB-A7B8-01A-12R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-US-A779-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Papillary Carcinoma of the Thyroid_Thyroid Gland (MMHCC)_GSE3678	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.65609
Pheochromocytoma and Paraganglioma_PCPG_TCGA-P8-A6RY-01A-12R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A70O-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-RW-A680-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-S7-A7WO-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-S7-A7X0-01A-12R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MX-05A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A819-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prestwick-559-1728	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Prestwick-674-3716	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Prestwick-675-3682	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Prestwick-685-3683	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Prestwick-691-4092	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Primary T cells from cord blood	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	-1.0	-1.72433
Prostate adenocarcinoma_PRAD_TCGA-EJ-5494-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-7125-11A-01R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-FC-A66V-01A-21R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-G9-6348-11A-01R-1789-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-G9-6356-01A-11R-1789-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-KK-A7AQ-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RAF1_overexpression_220_GSE42964	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.68761
RCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.5112
RL95-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03483
RPMI7951	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44879
Rectum adenocarcinoma_READ_TCGA-AG-4021-01A-01R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Rectum adenocarcinoma_READ_TCGA-EI-6513-01A-21R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Rectum adenocarcinoma_READ_TCGA-F5-6702-01A-11R-1830-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Rectum adenocarcinoma_READ_TCGA-F5-6810-01A-11R-1830-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SAOS2	BioGPS Cell Line Gene Expression Profiles	1.0	1.67882
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.935201
SF126	GDSC Cell Line Gene Expression Profiles	-1.0	-1.42197
SH4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33233
SHSYSY-RA	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.1397
SK-LMS-1	GDSC Cell Line Gene Expression Profiles	1.0	2.47577
SK-MEL-3	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.53061
SK-MEL-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.65541
SK-MEL-30	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SK-MES-1	GDSC Cell Line Gene Expression Profiles	1.0	2.27877
SKBR3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.61885
SKES1	CCLE Cell Line Gene CNV Profiles	1.0	1.73688
SKM-1	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.53061
SKMEL3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.7611
SNB19	BioGPS Cell Line Gene Expression Profiles	1.0	0.89838
SNU-175	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SNU-475	GDSC Cell Line Gene Expression Profiles	1.0	1.51515
SNU324	CCLE Cell Line Gene CNV Profiles	1.0	1.55999
SNU601	CCLE Cell Line Gene CNV Profiles	1.0	1.38488
SOX2	CHEA Transcription Factor Targets	1.0	null
SOX2-21211035-LN229_GBM-HUMAN	CHEA Transcription Factor Binding Site Profiles	1.0	null
SPANX family protein	InterPro Predicted Protein Domain Annotations	1.0	null
SR-95639A-6632	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SRF	JASPAR Predicted Transcription Factor Targets	1.0	null
SUDHL10	CCLE Cell Line Gene CNV Profiles	1.0	2.36415
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.00085
SUM 52PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.56369
SUM1315MO2	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.795697
SUM159PT	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.02231
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.43041
SW 780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.893168
SW 837	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43758
SW1271	CCLE Cell Line Gene CNV Profiles	1.0	1.61448
SW900	CCLE Cell Line Gene CNV Profiles	1.0	1.34444
Sarcoma_SARC_TCGA-DX-A6B8-01A-11R-A30C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sarcoma_SARC_TCGA-KF-A41W-01A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sarcoma_SARC_TCGA-QQ-A5VC-01A-31R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sarcoma_SARC_TCGA-X6-A7W8-01A-21R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SkeletalMuscle	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.07011
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2J8-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2M5-06A-12R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2MC-06A-12R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
T3M10	CCLE Cell Line Gene CNV Profiles	1.0	1.41107
TBP	TRANSFAC Predicted Transcription Factor Targets	1.0	null
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08163
TCCSUP	GDSC Cell Line Gene Expression Profiles	1.0	2.47116
TGBC1TKB	GDSC Cell Line Gene Expression Profiles	1.0	1.56439
TP63	JASPAR Predicted Transcription Factor Targets	1.0	null
TYK-nu	GDSC Cell Line Gene Expression Profiles	-1.0	-1.51916
Testis	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.55635
TestisGermCell	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.11423
TestisIntersitial	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.921402
TestisLeydigCell	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.31116
TestisSeminiferousTubule	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	2.21067
U-2 OS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.993117
U20S	BioGPS Cell Line Gene Expression Profiles	1.0	1.20792
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.91033
UO31	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.983
Uterine Carcinosarcoma_UCS_TCGA-N8-A4PI-01A-21R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
UterusCorpus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.931901
XBP1_OE_GDS2861_60_human_MCF7 breast cancer cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.85055
ZR7530	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.43329
ZR75B	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.15821
akap3	GeneRIF Biological Term Annotations	1.0	null
alfuzosin-4644	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
alpha-ergocryptine-3817	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
animal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
anisomycin-5364	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
antigens	GeneRIF Biological Term Annotations	1.0	null
arsenic trioxide_homo sapiens_gpl201_gse48441	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
azoospermia; infertility, male; oligospermia	GAD Gene-Disease Associations	1.0	null
benzathine benzylpenicillin-4140	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
betonicine-3745	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
breast	GTEx Tissue Gene Expression Profiles	1.0	0.874773
bromopride-2182	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
bronchus	HPA Tissue Protein Expression Profiles	1.0	1.61187
c-MYC_KD_GDS2526_109_human_Hela cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
c-MYC_KD_GDS2526_110_human_BT-474 BREAST CANCER cell line	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
c-MYC_KD_GDS2526_112_human_MCF-7 BREAST CANCER cell line	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
caffeic acid-5352	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
calcium folinate-3703	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cancer	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.040512
cancertestis	GeneRIF Biological Term Annotations	1.0	null
carbamazepine-952	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
carbenoxolone-3353	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cardiovascular	GAD High Level Gene-Disease Associations	1.0	0.293278
cefepime-6159	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
celastrol-887	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
cell part	GO Cellular Component Annotations	1.0	null
cell part	LOCATE Curated Protein Localization Annotations	1.0	null
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
cellular_component	GO Cellular Component Annotations	1.0	null
cellular_component	LOCATE Curated Protein Localization Annotations	1.0	null
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
cerebellum	HPA Tissue Protein Expression Profiles	-1.0	-0.70726
cervix uteri	GTEx Tissue Gene Expression Profiles	-1.0	-0.887209
chlorpromazine-1055	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
chlorpropamide-5391	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cisplatin_homo sapiens_gds3910	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cisplatin_homo sapiens_gpl570_gds3910	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
class	GeneRIF Biological Term Annotations	1.0	null
clemizole-3672	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
clomifene-6648	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
comparing	GeneRIF Biological Term Annotations	1.0	null
controls	GeneRIF Biological Term Annotations	1.0	null
ctp11	GeneRIF Biological Term Annotations	1.0	null
cutaneous	GeneRIF Biological Term Annotations	1.0	null
cytochalasin B-1122	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cytoplasm	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
cytoplasm	GO Cellular Component Annotations	1.0	null
decitabine_homo sapiens_gpl571_gse29077	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
demecolcine-1103	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
desoxycortone-5357	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
difference	GeneRIF Biological Term Annotations	1.0	null
disease	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.039293
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.040141
dosage	GeneRIF Biological Term Annotations	1.0	null
downs	GeneRIF Biological Term Annotations	1.0	null
doxorubicin_homo sapiens_gpl570_gse46493	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ejaculated	GeneRIF Biological Term Annotations	1.0	null
epidermal cell	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
epidermis	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
epididymis	HPA Tissue Protein Expression Profiles	-1.0	-1.12486
esophagus	HPA Tissue Protein Expression Profiles	1.0	1.61187
estradiol-6957	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
fallopian tube	GTEx Tissue Gene Expression Profiles	-1.0	-0.887209
felodipine-965	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
fenoprofen-3612	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
fludroxycortide-3679	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
flumetasone-3712	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
fluphenazine-1075	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
fluvoxamine-3995	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
foliosidine-3739	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
gata3_21892208_mda_mb_231_gof_human_gpl570_gds4080	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.56088
genetic	GeneRIF Biological Term Annotations	1.0	null
gramine-3999	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
haloperidol-1628	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
harmalol-5076	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
hepatocellular	GeneRIF Biological Term Annotations	1.0	null
hippocampus	HPA Tissue Protein Expression Profiles	-1.0	-1.12486
hsa-miR-371-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
hsa-miR-4317	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
hydralazine-3724	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
hydrastinine-5075	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
iPS-20b Cells	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	1.87232
including	GeneRIF Biological Term Annotations	1.0	null
integument	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
intracellular membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
intracellular membrane-bounded organelle	GO Cellular Component Annotations	1.0	null
intracellular membrane-bounded organelle	LOCATE Curated Protein Localization Annotations	1.0	null
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
intracellular organelle	GO Cellular Component Annotations	1.0	null
intracellular organelle	LOCATE Curated Protein Localization Annotations	1.0	null
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
intracellular part	GO Cellular Component Annotations	1.0	null
intracellular part	LOCATE Curated Protein Localization Annotations	1.0	null
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
iohexol-4643	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ioversol-5326	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
isoconazole-7211	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
isolation	GeneRIF Biological Term Annotations	1.0	null
kidney	GTEx Tissue Gene Expression Profiles	1.0	1.11327
levonorgestrel-3708	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
lithocholic acid-3816	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
liver	GTEx Tissue Gene Expression Profiles	-1.0	-0.887209
loxapine-6694	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
lung	HPA Tissue Protein Expression Profiles	1.0	0.927101
lymph node	HPA Tissue Protein Expression Profiles	-1.0	-1.12486
mRNA_POU5F1_20526341	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
male	GeneRIF Biological Term Annotations	1.0	null
male reproductive organ cancer	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.344207
melanocyte	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
melanoma	GeneRIF Biological Term Annotations	1.0	null
melanoma cell	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
melanoma cell line	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
membrane-bounded organelle	GO Cellular Component Annotations	1.0	null
membrane-bounded organelle	LOCATE Curated Protein Localization Annotations	1.0	null
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
metabolic	GAD High Level Gene-Disease Associations	1.0	0.293278
metaraminol-3669	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
naftidrofuryl-5287	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
naftifine-3536	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
nucleus	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
nucleus	GO Cellular Component Annotations	1.0	null
nucleus	LOCATE Curated Protein Localization Annotations	1.0	null
nucleus	LOCATE Predicted Protein Localization Annotations	1.0	null
organ system cancer	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.040706
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
organelle	GO Cellular Component Annotations	1.0	null
organelle	LOCATE Curated Protein Localization Annotations	1.0	null
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
oxetacaine-4246	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
parathyroid gland	HPA Tissue Protein Expression Profiles	-1.0	-1.12486
particular	GeneRIF Biological Term Annotations	1.0	null
patient	GeneRIF Biological Term Annotations	1.0	null
pentetic acid-4669	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
phthalylsulfathiazole-5249	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
pilocarpine-5341	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
pineal_night	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.917469
pioglitazone-7088	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
pirinixic acid-481	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
population	GeneRIF Biological Term Annotations	1.0	null
propranolol-3059	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
prostate cancer	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.351187
raubasine-5459	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
reports	GeneRIF Biological Term Annotations	1.0	null
reproduction	GAD High Level Gene-Disease Associations	1.0	0.293278
reproductive organ cancer	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.225229
salivary gland	GTEx Tissue Gene Expression Profiles	-1.0	-0.887209
sample	GeneRIF Biological Term Annotations	1.0	null
seminal vesicle	HPA Tissue Protein Expression Profiles	-1.0	-1.12486
sera	GeneRIF Biological Term Annotations	1.0	null
sicilian	GeneRIF Biological Term Annotations	1.0	null
significant	GeneRIF Biological Term Annotations	1.0	null
sin3a_22783022_mcf7_lof_human_gpl570_gds4388	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.338909
sirolimus-1059	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
skin	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
skin cancer cell	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
smooth muscle	HPA Tissue Protein Expression Profiles	1.0	1.61187
sodium phenylbutyrate-407	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
soft tissue	HPA Tissue Protein Expression Profiles	-1.0	-0.939735
spanxb	GeneRIF Biological Term Annotations	1.0	null
spanxc	GeneRIF Biological Term Annotations	1.0	null
spermatids	GeneRIF Biological Term Annotations	1.0	null
spermatozoa	GeneRIF Biological Term Annotations	1.0	null
spiradoline-3818	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
statistical	GeneRIF Biological Term Annotations	1.0	null
subjects	GeneRIF Biological Term Annotations	1.0	null
syndrome	GeneRIF Biological Term Annotations	1.0	null
testes	GeneRIF Biological Term Annotations	1.0	null
thalidomide-2258	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
thapsigargin-7100	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
tiaprofenic acid-4091	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
tissues, cell types and enzyme sources	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
tolazamide-4003	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
trimethoprim-3678	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
troleandomycin-1465	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
tyrphostin AG-1478-1141	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
undescended	GeneRIF Biological Term Annotations	1.0	null
vagina	GTEx Tissue Gene Expression Profiles	-1.0	-0.887209
variability	GeneRIF Biological Term Annotations	1.0	null
velnacrine-4997	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
zidovudine-5333	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
zimeldine-1930	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null