association	dataset	threshold value	standardized value
A-375	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.964437
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.31776
A-431	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.896518
A388	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00154
ABC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42283
ABC1	CCLE Cell Line Gene CNV Profiles	1.0	1.58238
ATR_knockdown_140_GSE31912	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.0906
BFTC-905	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
BFTC-905	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.0084
BICR 10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.23409
BICR 22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24037
BICR18	CCLE Cell Line Gene CNV Profiles	1.0	1.72455
BICR22	CCLE Cell Line Gene CNV Profiles	1.0	2.64688
BICR22	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28804
CA SKI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04971
CAL-85-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
CALU-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.850531
CAOV3	CCLE Cell Line Gene CNV Profiles	1.0	2.34773
CAPAN-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
CAPAN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.960255
CCK81	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4508
COLO 679	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.59239
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.903171
COLO679	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71838
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.972892
COR-L47	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15657
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.49231
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1223
DB	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33308
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22147
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.903171
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.924779
EFM-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.904406
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
FU97	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.69416
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4347
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.964437
G141	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02861
GP2D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.62772
GSS	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47398
H3255	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
HARA	CCLE Cell Line Gene CNV Profiles	1.0	1.60797
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28804
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03554
HCC2270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.924114
HCC2302	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.10101
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.904406
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33987
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00154
HCC461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.924779
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.80191
HCC89	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.987695
HCC95	CCLE Cell Line Gene CNV Profiles	1.0	2.01289
HCE-4	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
HDMYZ	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68636
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16105
HPAFII	CCLE Cell Line Gene CNV Profiles	-1.0	-2.3514
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.62988
HS746T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58379
HT-144	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.980914
HTC-C3	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.04917
IGROV-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29774
IGROV1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.515
ISTMES2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42482
JRA - Juvenile rheumatoid arthritis_Peripheral blood mononuclear cell_GSE7753	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.42345
KDM4C_natural variation_GSE41040_588_human_fibroblasts fron neonatal foreskin	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.869698
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.882294
KNS-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2987
KNS62	CCLE Cell Line Gene CNV Profiles	1.0	1.41197
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.824434
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.49175
KYSE-180	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
KYSE-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.93788
KYSE-270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4347
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.84172
KYSE180	CCLE Cell Line Gene CNV Profiles	1.0	1.53517
KYSE270	CCLE Cell Line Gene CNV Profiles	1.0	2.21066
LB771-HNC	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
LBP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
LU-65	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
LU65	CCLE Cell Line Gene CNV Profiles	1.0	2.90856
LUDLU1	CCLE Cell Line Gene CNV Profiles	1.0	1.40182
MAPK1_knockdown_145_GSE31912	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.24956
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22125
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.12404
MDA-MB-453	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.867503
MDAMB436	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
MDAPCA2B	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55907
MEK_INHIBITION_GDS5029_279_human_SW480 KRAS-mutant colorectal cancer cell line - 16hours	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
MFE-280	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22195
MM.1S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08518
NCI-H1304	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
NCI-H1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.893694
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40086
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33987
NCI-H1734	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24419
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30892
NCI-H2052	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00154
NCI-H2110	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03554
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.964437
NCI-H2172	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14033
NCI-H2196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17908
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1223
NCI-H345	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.882294
NCI-H441	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.904406
NCI-H520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10852
NCI-H650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.71827
NCI-H810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.18787
NCIH1435	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32913
NCIH209	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53837
NCIH23	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5561
NCIH2342	CCLE Cell Line Gene CNV Profiles	1.0	1.6008
NCIH3255	CCLE Cell Line Gene CNV Profiles	1.0	1.60504
NCIH650	CCLE Cell Line Gene CNV Profiles	-1.0	-1.77811
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
OAW-28	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
OAW28	CCLE Cell Line Gene CNV Profiles	1.0	1.34195
OAW28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.849633
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25212
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.872541
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.66552
OVCAR-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.954491
OVKATE	CCLE Cell Line Gene CNV Profiles	1.0	1.81257
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.41879
PA-TU-8988S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1223
PANC 04.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.995
PANC 05.04	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11534
PANC0403	CCLE Cell Line Gene CNV Profiles	-1.0	-1.80605
PCI-30	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
PE/CA-PJ15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.69416
PIK3CA_mutant_27_GDS4053	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-2.08195
Psoriasis vulgaris_Skin tissue_GSE14905	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.36093
RAMOS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.867236
RARA_KD_GDS4065_42_human_MCF-7	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
RERF-GC-1B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.995
RERFGC1B	CCLE Cell Line Gene CNV Profiles	-1.0	-2.04543
RKN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36516
RKN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.855098
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.66552
RT-112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.867236
RXF393	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.04917
SBC5	CCLE Cell Line Gene CNV Profiles	-1.0	-1.80072
SCH	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.04917
SCLC-22H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20012
SF539	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06288
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37555
SNU-216	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.46125
SNU-398	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.04917
SNU-398	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.10101
SNU-668	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.850531
SNU-719	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.76904
SNU1214	CCLE Cell Line Gene CNV Profiles	1.0	1.66539
SNU182	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54592
SNU216	CCLE Cell Line Gene CNV Profiles	-1.0	-2.02564
SNU503	CCLE Cell Line Gene CNV Profiles	1.0	1.82091
SNU719	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33298
SNU899	CCLE Cell Line Gene CNV Profiles	1.0	1.3691
SNUC2A	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50329
STAT1_KD_GDS4754_159_human_JURKAT	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
STAT4	MotifMap Predicted Transcription Factor Targets	1.0	null
SUIT2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.94803
SW 1463	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3153
SW1463	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3788
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.914964
T47D	CCLE Cell Line Gene CNV Profiles	1.0	1.62858
T98G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.924779
TE-6	COSMIC Cell Line Gene CNV Profiles	1.0	2.0703
TE441T	CCLE Cell Line Gene CNV Profiles	-1.0	-2.15639
TE6	CCLE Cell Line Gene CNV Profiles	1.0	1.82258
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
TT	CCLE Cell Line Gene CNV Profiles	1.0	1.47627
Type 1 diabetes mellitus_T lymphocyte_GSE10586	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-2.12371
U-2 OS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16105
U-2932	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01267
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.93814
VMRCLCP	CCLE Cell Line Gene CNV Profiles	1.0	1.95702
YY1_KD_GDS3788_488_human_HeLa	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
bladder	GTEx Tissue Gene Expression Profiles	1.0	1.04699
enzalutamide_homo sapiens_gpl570_gse44905	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null