association	dataset	threshold value	standardized value
12941627-table1b	GeneSigDB Published Gene Signatures	1.0	null
15474998-tableS1c	GeneSigDB Published Gene Signatures	1.0	null
15793299-TableC	GeneSigDB Published Gene Signatures	1.0	null
16651409-SuppTable2	GeneSigDB Published Gene Signatures	1.0	null
16778221-Table2	GeneSigDB Published Gene Signatures	1.0	null
18180321-SuppTable2	GeneSigDB Published Gene Signatures	1.0	null
18394172-S3GeneList	GeneSigDB Published Gene Signatures	1.0	null
18394172-S4GeneList	GeneSigDB Published Gene Signatures	1.0	null
20460173-ImmPortComprehensiveListofImmune-RelatedGenes	GeneSigDB Published Gene Signatures	1.0	null
59M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.942725
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.77717
A-Netherlands-602-2009(H1N1)_3Hour_None_GSE40844	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.68714
A4/FUK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09566
A4FUK	CCLE Cell Line Gene CNV Profiles	1.0	2.38251
A704	CCLE Cell Line Gene CNV Profiles	1.0	1.48545
ACHN	CCLE Cell Line Gene CNV Profiles	1.0	1.73671
Acute Myeloid Leukemia_LAML_TCGA-AB-2824-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Adaptive Immune System	Reactome Pathways	1.0	null
BGC823	CCLE Cell Line Gene CNV Profiles	1.0	1.43892
BT-483	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.876609
Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A7PW-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YW-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-FG-A6J1-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CAL-85-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01929
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46006
CAR-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37032
CBX2	ENCODE Transcription Factor Targets	1.0	null
CBX2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CGTHW1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63567
CHD1	ENCODE Transcription Factor Targets	1.0	null
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CHK1_KD_GSE54268_666_human_MCF-10A	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
CL-40	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37458
COLO 678	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.831214
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58785
CORL105	CCLE Cell Line Gene CNV Profiles	-1.0	-1.87639
COV318	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.945112
CRX_DN.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	-1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
CTCF_lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Carcinoma	CTD Gene-Disease Associations	1.0	2.88009
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37032
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21594
DMS454	CCLE Cell Line Gene CNV Profiles	1.0	1.45853
DMS79	CCLE Cell Line Gene CNV Profiles	-1.0	-1.73146
DU4475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16381
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	1.01399
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864718
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2183
EJM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47373
ELF1	CHEA Transcription Factor Targets	1.0	null
ELF1-20517297-JURKAT-HUMAN	CHEA Transcription Factor Binding Site Profiles	1.0	null
EP300	ENCODE Transcription Factor Targets	1.0	null
EP300_ECC-1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
EZH2	ENCODE Transcription Factor Targets	1.0	null
EZH2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOS	ENCODE Transcription Factor Targets	1.0	null
FOS_MCF 10A_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
G112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37032
G120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.04913
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.47696
G22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.31565
G61	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
GATA1	CHEA Transcription Factor Targets	1.0	null
GATA1-21571218-MEGAKARYOCYTES-HUMAN	CHEA Transcription Factor Binding Site Profiles	1.0	null
GATA2	CHEA Transcription Factor Targets	1.0	null
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
GATA2-21571218-MEGAKARYOCYTES-HUMAN	CHEA Transcription Factor Binding Site Profiles	1.0	null
GMS10	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3261
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
H2AFZ_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H2AFZ_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_H7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_H7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_NT2-D1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_cardiac mesoderm_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_cardiac mesoderm_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_cardiac mesoderm_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_cardiac mesoderm_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_cardiac mesoderm_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_kidney epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_megakaryocyte_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_megakaryocyte_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_CH12.LX_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_CH12.LX_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_CH12.LX_mm9_4	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K56ac_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K9ac_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K9me1_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.981479
HCC1162	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
HCC1187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
HCC1576	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
HCC2302	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.83724
HCC461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37032
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21594
HDAC1	ENCODE Transcription Factor Targets	1.0	null
HDAC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HDAC6	ENCODE Transcription Factor Targets	1.0	null
HDAC6_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864718
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58785
HOP-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29333
HPAFII	CCLE Cell Line Gene CNV Profiles	1.0	1.80177
HS 695T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.83398
HS 69ST	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.942725
HS-SULTAN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03578
HT-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03233
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46006
HUH1	CCLE Cell Line Gene CNV Profiles	1.0	1.43462
HUPT3	CCLE Cell Line Gene CNV Profiles	-1.0	-2.01704
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6938-11A-01R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JT-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hyperplasia	CTD Gene-Disease Associations	1.0	1.14473
IGR37	CCLE Cell Line Gene CNV Profiles	-1.0	-1.69943
IGR39	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45897
IMR-32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09566
Immune System	Reactome Pathways	1.0	null
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell	Reactome Pathways	1.0	null
Infertility, Female	CTD Gene-Disease Associations	1.0	1.24433
Infertility, Male	CTD Gene-Disease Associations	1.0	1.10803
Inflammation	CTD Gene-Disease Associations	1.0	1.0561
JEKO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.81432
JHH-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864718
JIMT-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10348
JJN-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58968
JM1	CCLE Cell Line Gene CNV Profiles	1.0	3.21688
JUN	TRANSFAC Predicted Transcription Factor Targets	1.0	null
JVM3	CCLE Cell Line Gene CNV Profiles	1.0	1.45537
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37458
KDM5A	ENCODE Transcription Factor Targets	1.0	null
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KDM5B	ENCODE Transcription Factor Targets	1.0	null
KDM5B_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KG-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.87308
KG1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.58988
KMS-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.46148
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.0102
KMS11	CCLE Cell Line Gene CNV Profiles	1.0	2.53855
KMS34	CCLE Cell Line Gene CNV Profiles	1.0	1.7254
KP2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4817
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
KURAMOCHI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19524
KYO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.8814
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08664
KYSE-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26601
Kidney Chromophobe_KICH_TCGA-KN-8419-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney Chromophobe_KICH_TCGA-KN-8425-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney Chromophobe_KICH_TCGA-KN-8430-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney Chromophobe_KICH_TCGA-KN-8431-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney Chromophobe_KICH_TCGA-KO-8403-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5705-11A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B4-5832-01A-11R-1672-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4985-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4994-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5187-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4891-01A-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-5678-11A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CW-6088-11A-01R-1672-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5453-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5454-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5455-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5463-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5467-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5987-11A-01R-1672-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-DV-5567-01A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-3467-01A-02R-1351-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-GL-A9DE-11A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-UN-AAZ9-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-Y8-A8RY-11A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LBP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
LN-18	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
LN-229	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.963382
LOVO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03578
Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10Q-11A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-50-5931-01A-11R-1755-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-21-5782-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-51-6867-01A-11R-2045-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-94-7033-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-94-7943-01A-11R-2187-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
MAX	ENCODE Transcription Factor Targets	1.0	null
MAX_NB4_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08664
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.863419
MDA-MB-435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58785
MDAMB134VI	CCLE Cell Line Gene CNV Profiles	1.0	1.62729
MDAMB436	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53752
MEC1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.32802
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03233
MKN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864718
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.42735
MKN7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60194
ML-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.74354
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10348
MYC	ENCODE Transcription Factor Targets	1.0	null
MYC_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Mammary Neoplasms, Animal	CTD Gene-Disease Associations	1.0	2.88009
Mammary Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	2.88009
NANOG	CHEA Transcription Factor Targets	1.0	null
NANOG-16518401-MESC-mouse	CHEA Transcription Factor Binding Site Profiles	1.0	null
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08664
NCI-H1299	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21594
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.932946
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46006
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08664
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08664
NCI-H1770	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01929
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.834534
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58968
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864718
NCI-H1944	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18398
NCI-H2110	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19524
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.47696
NCI-H226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.875312
NCI-H28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.33424
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.04678
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.98126
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.951145
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64213
NCIH1092	CCLE Cell Line Gene CNV Profiles	1.0	2.00817
NCIH1105	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76448
NCIH1355	CCLE Cell Line Gene CNV Profiles	1.0	1.8885
NCIH1385	CCLE Cell Line Gene CNV Profiles	1.0	1.40778
NCIH1792	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37971
NCIH2106	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57303
NCIH2170	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33463
NCIH596	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35257
NCIH660	CCLE Cell Line Gene CNV Profiles	1.0	2.00335
NFATC3	TRANSFAC Predicted Transcription Factor Targets	1.0	null
NFE2L2	CHEA Transcription Factor Targets	1.0	null
NFE2L2-20460467-MEF-MOUSE	CHEA Transcription Factor Binding Site Profiles	1.0	null
NR3C1	JASPAR Predicted Transcription Factor Targets	1.0	null
NRF2-20460467-MEF-MOUSE	CHEA Transcription Factor Binding Site Profiles	1.0	null
NUDHL1	CCLE Cell Line Gene CNV Profiles	1.0	1.40397
NURR1	MotifMap Predicted Transcription Factor Targets	1.0	null
Necrosis	CTD Gene-Disease Associations	1.0	1.13827
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.963382
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03233
OE19	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
OE19	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.24687
PANC0327	CCLE Cell Line Gene CNV Profiles	1.0	1.84187
PL-21	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07557
POLR2A	ENCODE Transcription Factor Targets	1.0	null
POLR2A_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2AphosphoS5_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2AphosphoS5_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2AphosphoS5_SK-N-MC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PXR (PXR:RXR)	MotifMap Predicted Transcription Factor Targets	1.0	null
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.11843
Prostate adenocarcinoma_PRAD_TCGA-XJ-A83F-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RBBP5	ENCODE Transcription Factor Targets	1.0	null
RBBP5_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RC-K8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.54895
RCOR1	CHEA Transcription Factor Targets	1.0	null
RCOR1-19997604-NEURONS-MOUSE	CHEA Transcription Factor Binding Site Profiles	1.0	null
REC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46682
REC1	CCLE Cell Line Gene CNV Profiles	1.0	1.80089
RKO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.93441
SAP30	ENCODE Transcription Factor Targets	1.0	null
SAP30_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SCLC-22H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.993656
SF268	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
SK-N-FI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22034
SKLU1	CCLE Cell Line Gene CNV Profiles	1.0	1.59761
SKM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.98516
SKNFI	CCLE Cell Line Gene CNV Profiles	1.0	1.3466
SNU-216	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41863
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
SNU-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16527
SNU-668	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19375
SNU213	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36393
SNU216	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4223
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
STAT3	ENCODE Transcription Factor Targets	1.0	null
STAT3_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
STAT5-23275557-MAMMARY-EPITHELIUM-MOUSE	CHEA Transcription Factor Binding Site Profiles	1.0	null
STAT5A	CHEA Transcription Factor Targets	1.0	null
STAT5B	TRANSFAC Predicted Transcription Factor Targets	1.0	null
SU-DHL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22034
SU-DHL-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22263
SU-DHL-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03233
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29333
SUM 149PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01929
SUM 52PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22792
SUZ12	ENCODE Transcription Factor Targets	1.0	null
SUZ12_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SW 620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.932946
Skin Cutaneous Melanoma_SKCM_TCGA-FR-A728-01A-11R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZE-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45733
T3M4	CCLE Cell Line Gene CNV Profiles	1.0	1.53879
TBX5	TRANSFAC Predicted Transcription Factor Targets	1.0	null
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
TYK-NU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
U-937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10348
U343	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33693
USF2	ENCODE Transcription Factor Targets	1.0	null
USF2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Uterine Cervical Neoplasms	CTD Gene-Disease Associations	1.0	1.04978
VMRC-LCD	COSMIC Cell Line Gene CNV Profiles	1.0	2.15316
VMRCLCD	CCLE Cell Line Gene CNV Profiles	1.0	2.20749
WM793	CCLE Cell Line Gene CNV Profiles	-1.0	-2.21614
Weight Loss	CTD Gene-Disease Associations	1.0	1.13075
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
ZNF263	ENCODE Transcription Factor Targets	1.0	null
ZNF263_HEK293_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abdomen	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.256234
aberrant	GeneRIF Biological Term Annotations	1.0	null
acute lymphoblastic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.095609
acute lymphoblastic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.269174
acute myeloid leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.080409
acute myeloid leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.087465
adiposetissue	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.07133
adult stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.078996
alitretinoin_rattus norvegicus_gpl85_mammary gland_gds2385	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.696989
bacterial infectious disease	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.04473
biliary epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.142638
bladder	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.078425
blast cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075504
blastomere	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071353
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.749992
blood cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.069197
blood vessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.588832
blood vessel endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.757432
bone marrow stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.327896
bonemarrow	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-2.72439
breast	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
breast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056422
cSARS Bat SRBD_36Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.1616
captopril_mus musculus_gpl1261_gds3683	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cardiovascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.536229
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.227752
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.227752
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
cell periphery	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
cell surface	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.2708
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.250751
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
cholecalciferol_mus musculus_gpl6246_gse41184	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cholelithiasis	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.879014
cholera	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.394118
chorioallantois	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.246442
corneal disease	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.523045
corneal dystrophy	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.920085
cytoplasmic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040574
dactinomycin_homo sapiens_gpl7172_gse12459	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
digits	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.943558
disease	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.224884
disease by infectious agent	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.040901
disease of anatomical entity	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.04221
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052964
encodes	GeneRIF Biological Term Annotations	1.0	null
endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.689634
endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.719524
endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.24565
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.08457
estradiol_mus musculus_gpl4134_gse23241	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
excretory gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
excretory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052116
exocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.068918
extracellular region	LOCATE Predicted Protein Localization Annotations	1.0	null
eye and adnexa disease	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.053812
eye disease	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.055899
female reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.220378
female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.377996
fertilizedegg	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.09466
fetal membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071782
fetus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058153
gall bladder	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.176269
gall bladder epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.625061
gallbladder disease	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.67312
gastrointestinal system disease	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.049809
gland	GeneRIF Biological Term Annotations	1.0	null
gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.690859
glandular epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.522405
golgi apparatus part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.059169
heart	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.5376
heart	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.541377
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.868951
hematopoietic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.083602
hematopoietic stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.076061
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.807299
high endothelial venule	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.36821
infertility	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.342006
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.994119
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.310783
intracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043158
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041902
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040432
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040185
irinotecan_rattus norvegicus_gpl1355_jejunum_gds3466	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
jurkat cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.388912
kg-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.35743
leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.082843
leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.090361
leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.914788
lymph	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.477367
lymph node	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.04928
lymphnode	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.37006
lymphoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.106439
lymphoblastic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.094336
lymphoblastic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.267791
lymphoblastoid cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.111856
lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.78938
lymphocytic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.12055
lymphocytic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.248361
lymphoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.787716
lymphoid tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.935341
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041169
macular corneal dystrophy	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	1.55779
mammary	GeneRIF Biological Term Annotations	1.0	null
mammary gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
mammary gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.218186
mammarygland.lact.	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	2.09859
marrow cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.080723
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043086
mesenteric lymph node	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.868951
mesentery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.765711
monocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.100761
mononuclear cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.084172
mononuclear phagocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.098843
morula	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.344079
mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.072152
mucous gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.176062
myeloid leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066706
myeloid leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071336
myeloid progenitor cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.079962
nervous system disease	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.045287
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041721
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040388
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052424
peritoneal cavity	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.185055
peritoneal exudate	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.275094
peritoneum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.43146
phagocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.087278
plasma membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
plasma membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
pou5f1_20526341_human_embryonic_stem_cells_hesc_lof_human_gpl6947_gse21135	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.010777
premonocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.648127
primary bacterial infectious disease	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.045475
protein-carbohydrate complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.12552
reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.372743
reproductive system disease	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.044654
salivarygland	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.868511
sensory system disease	DISEASES Text-mining Gene-Disease Assocation Evidence Scores	1.0	0.051562
sirolimus_homo sapiens_gpl2895_gse16944	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
skeletalmuscle	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.960842
snoutepidermis	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.29679
splicing	GeneRIF Biological Term Annotations	1.0	null
t-lymphoblastic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.308251
thorax	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
thorax	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054949
thyroid	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.55471
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.692493
trachea	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.28531
trans-golgi network	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.179459
truncated	GeneRIF Biological Term Annotations	1.0	null
trunk	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
trunk	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075176
urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.342971
uterine endometrium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.249329
uterine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.620217
uterus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.073326
variants	GeneRIF Biological Term Annotations	1.0	null
various	GeneRIF Biological Term Annotations	1.0	null
vascular endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.4445
vascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.608124
vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.333028
venule	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.648532
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051286
vitamin e_mus musculus_gpl1261_gse42813	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.698625
yy1_22711985_skeletal_muscle_lof_mouse_gpl8321_gse39009	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.112578
zygote	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.069182